BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E10LP1|AL424983
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1544 0.0
>3x_Contig1619
Length = 7770
Score = 1544 bits (774), Expect = 0.0
Identities = 799/810 (98%), Gaps = 2/810 (0%)
Strand = Plus / Plus
Query: 1 accctagggttgggtgatgtcgcgcaggattataatataaacaaaccccgcggctacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 accctagggttgggtgatgtcgcgcaggattataatataaacaaaccccgcggctacctc 1788
Query: 61 cagtattgaaagtagccgcggggaatattattaatatataaattatctactagtgattct 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1789 cagtattgaaagtagccgcggngaatattattaatatataaattatctactagtgattct 1848
Query: 121 acaatttctaaaaatattaaattagaattatgtaataaattaaatgaagaattaaatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1849 acaatttctaaaaatattaaattagaattatgtaataaattaaatgaagaattaaatact 1908
Query: 181 aattcttcaaaccatactcccccccgcncsgcatcgccctaccgtagg-tagggcgagcc 239
||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 1909 aattcttcaaaccatactcccccccgcgcggcatcgccctaccgtagggtagggcgagcc 1968
Query: 240 gcgcggg-aatatgatgatattvtttctaavattaatattgaatatattgtaggatttat 298
||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 1969 gcgcggggaatatgatgatattatttctaaaattaatattgaatatattgtaggatttat 2028
Query: 299 cgaagctgaaggtcatttagctatttctaaaaatataaacaataactataaaataagttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 cgaagctgaaggtcatttagctatttctaaaaatataaacaataactataaaataagttt 2088
Query: 359 agaagtatctcaacatataaattcacccgcbgctcctcccttcggggggagaccgcgggg 418
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2089 agaagtatctcaacatataaattcacccgcggctcctcccttcggggggagaccgcgggg 2148
Query: 419 aagatttaatgaaggctattcaagatactattttamattgaactcctgataatagtttat 478
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2149 aagatttaatgaaggctattcaagatactattttaaattgaactcctgataatagtttat 2208
Query: 479 tatatgatttacctaaatctactaataaaatttataaaccccgcggctcctcccctggta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 tatatgatttacctaaatctactaataaaatttataaaccccgcggctcctcccctggta 2268
Query: 539 atccctttaavggggaggagtccgcggggaagatagtaatavatatagattttaaatttc 598
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2269 atccctttaaaggggaggagtccgcggggaagatagtaataaatatagattttaaatttc 2328
Query: 599 tagtactgatagattatattatcaagtatttccaactatgttaaatagtggattatatac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2329 tagtactgatagattatattatcaagtatttccaactatgttaaatagtggattatatac 2388
Query: 659 tagaaaatatattgattttgtaatgtgattttctagtattatcattataaaacatggttt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2389 tagaaaatatattgattttgtaatgtgattttctagtattatcattataaaacatggttt 2448
Query: 719 acataaaacattagagggtcaattattattagccccccgcggctcacccaaccctagggt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 acataaaacattagagggtcaattattattagccccccgcggctcacccaaccctagggt 2508
Query: 779 tgggtgatgccgcggggggaagataaattt 808
||||||||||||||||||||||||||||||
Sbjct: 2509 tgggtgatgccgcggggggaagataaattt 2538
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6468
Number of Sequences: 1807
Number of extensions: 6468
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)